When recording from stereo mix, one channel is lower level and has a weird beginning waveform - see image.
All balance controls on Realtek HD audio manager and windows mixer is middle.
Windows 7
Audacity 2.0.2
i7 processor with 32g RAM
Intel mb with Realtek HD audio
Solution to this was to switch the speaker connection to the front audio out port.
Then a popup in Windows asked me to select that input.
Now the levels are matched.
Best I can tell is that the rear audio out port on this MB has a hardware problem.